[PDF] Top 20 A NEW METHOD FOR ESTIMATING THE EFFECTIVE POPULATION SIZE FROM ALLELE FREQUENCY CHANGES
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A NEW METHOD FOR ESTIMATING THE EFFECTIVE POPULATION SIZE FROM ALLELE FREQUENCY CHANGES
... Esti- mates of effective population sizes and of the standard errors of the estimates are computed for data on two fly populations that have been discussed in earlier papers.. I[r] ... See full document
18
Estimating the effective population size from temporal allele frequency changes in experimental evolution
... dows with a fixed number of SNPs. Using windows of fixed lengths in base pairs would affect the variance of the estima- tor (Figure 4) but does not distort the mean. All these ap- proaches, however, do not account for the ... See full document
35
Estimating Effective Population Size and Migration Rates From Genetic Samples Over Space and Time
... of population structures the estimation of effective size, methods employing a and migration patterns, ...priori from rium (Hill 1981), identity disequilibrium (Vitalis and another source of ... See full document
18
Using Maximum Likelihood to Estimate Population Size From Temporal Changes in Allele Frequencies
... temporal changes in allele frequencies to estimate the number of breeding individuals in a ...variance effective population ...temporal allele frequency data from three or ... See full document
8
A Method for Estimating the Intensity of Overdominant Selection From the Distribution of Allele Frequencies
... A method is proposed for estimating the intensity of overdominant selection scaled by the effective population size, S ⫽ 2Ns, from allele ...The method is based on ... See full document
8
Estimating Effective Population Size from Temporally Spaced Samples with a Novel, Efficient Maximum-Likelihood Algorithm
... sample size of n diploid individuals (a total of 2n alleles), as described in Equation ...Initial allele frequencies were drawn from the uniform distri- ... See full document
9
The annual number of breeding adults and the effective population size of syntopic newts (Triturus cristatus, T-marmoratus)
... not size-selective, there was no evidence for biased N b and N e due to selection at early life ...no method available that calculates N e taking migration into ...migration from sources with ... See full document
13
Temporal allele frequency change and estimation of effective size in populations with overlapping generations.
... Genetic drift when generations overlap: a simula- tion: As indicated above, the basic question when ex- tending the temporal method to populations with over- lapping [r] ... See full document
14
Cost Effective Discovery of Nucleotide Polymorphisms in Populations of an Allopolyploid Species Using Pool Seq
... generated from a small amount of relatively large primer dimers that remained in the emulsion PCR (emPCR) ...per population per homeolog was ...ranging from 6 to 332, with a standard deviation of ... See full document
16
Empirical Bayes Procedure for Estimating Genetic Distance Between Populations and Effective Population Size
... general method can easily be extended to any ranged from ⵑ10 to 20, and the ratio of males to females parameter that is a function of multinomial ...squeezed from the females When the parameter of ... See full document
18
Estimating Effective Population Size or Mutation Rate With Microsatellites
... and allele frequency, an estimator properties of the homozygosity-based estimator ˜ F ...sample size, n, a large Under the single-step stepwise mutation model, for number of samples are simulated ... See full document
10
Likelihood-Based Estimation of the Effective Population Size Using Temporal Changes in Allele Frequencies: A Genealogical Approach
... It is interesting that increasing the number of alleles advantage of a posterior distribution is that it allows the in the samples by having more loci with rare alleles visualization of the information brought by the ... See full document
11
Maximum-Likelihood and Markov Chain Monte Carlo Approaches to Estimate Inbreeding and Effective Size From Allele Frequency Changes
... obtained from computer simulations (assum- equal to 62 and 35, ...computed from Equation 15 ...the method computed from Equation Anderson et ...a population are equal to 48 and 25, ... See full document
16
How Old Is the Most Recent Ancestor of Two Copies of an Allele?
... an allele is the structure of the neighboring region of the genome, which we term the genomic background of the ...the changes in allele frequencies over time and developed by him in many articles in ... See full document
12
On the Distribution of Temporal Variations in Allele Frequency
... female effective from Drosophila ...842–854. population size of red drum (Sciaenops ocellatus) in the northern Williamson, ...estimate population size from temporal ... See full document
6
A generalized approach for estimating effective population size from temporal changes in allele frequency.
... If sampling is before reproduction (plan 11), the initial sample and the 2N, gametes representing the effective population size (and, hence, all future generations) can[r] ... See full document
13
Estimating the Size of the Methamphetamine Using Population in New York City Using Network Sampling Techniques
... in New York City for decades (Drug Enforcement Administration (DEA) 2004, 2006, National Drug Intelligence Center (NDIC) ...Yet New York’s metham- phetamine markets have remained mostly inaccessible to re- ... See full document
8
Historical Analysis of Genetic Variation Reveals Low Effective Population Size in a Northern Pike (Esox lucius) Population
... Analysis of historical effective population size provides a means to compare changes in population dynamic parameters ( e.g., population size and growth rate, harvested y[r] ... See full document
10
Redistribution of Gene Frequency and Changes of Genetic Variation Following a Bottleneck in Population Size
... information from laboratory experiments is very ...of frequency distributions. When a large population at mutation-selection balance passes through a rapid bottleneck in size, the ... See full document
18
Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling.
... The method is somewhat more successful when it begins from a reasonable genealogy (data not shown). Genealogies from the short chains should not be used in the final es[r] ... See full document
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