[PDF] Top 20 Mixture models for gene expression experiments with two species
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Mixture models for gene expression experiments with two species
... of expression in genes due to treatment intervention in mice tended to be larger than in genes where differential expression is exhibited in ...both species were (− ...only two observations. ... See full document
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... one species can be a predictive factor for the other ...across species [23], linear discriminant analysis was used for lung injury biomarker detection across multiple species [24], k-nearest neighbor ... See full document
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Gene selection and cancer type classification of diffuse large-B-cell lymphoma using a bivariate mixture model for two-species data
... the Gene Expression Omnibus (GEO) database ...from two series with GEO accession num- ber: GSE10846 [7] and GSE11318 ...microarray gene expression data were also LOESS nor- malized by ... See full document
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How many replicates of arrays are required to detect gene expression changes in microarray experiments? A mixture model approach
... fitted models are all essentially 0, and their variances decrease as k ...the gene-specific (or test-specific) Type I error rate is = 1/1176 = ...an expression change d = 3 with probability at least ... See full document
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Differential timing of gene expression regulation between leptocephali of the two Anguilla eel species in the Sargasso Sea
... in gene ex- pression in levels represents a major source of evolutionary novelty, which in turn can lead to phenotypic divergence through natural selection (Wray ...in gene expression can evolve very ... See full document
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Differential timing of gene expression regulation between leptocephali of the two Anguilla eel species in the Sargasso Sea
... as two ecologically very similar but reproductively and geographically distinct ...of gene expression by means of microarray experiments with American and European eel leptocephali collected ... See full document
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On the Bayesian analysis of species sampling mixture models for density estimation
... 82 galaxies are moving away from our galaxy. Some galaxies are thought to be moving at similar speeds whilst other move much faster or slower. Inferring the clusters of galaxy is the main inferential problem. Of course, ... See full document
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Is the Biology of M. chitwoodi and M. hapla Reflected in Their Genomes?
... than two neighboring genes in the same order were hardly identified between RKNs and ...single gene of ...that two or three separate nearby genes of ...elegans gene in the left, middle, or ... See full document
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Gene specific patterns of expression variation across organs and species
... of expression variance explained by species (x-axis) and by organs (y-axis) for each of the 6283 orthologous genes (dots) using linear ...which species-explained variance is twofold greater than ... See full document
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Partial mixture model for tight clustering of gene expression time course
... to gene expression clustering, it is capable of locating the key com- ponents in an unsupervised ...from two real datasets, inference of the sets of scattered genes was also highlighted in this ... See full document
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A mixture model approach to multiple testing for the genetic analysis of gene expression
... the mixture model for the DDX17 ...DDX17 gene calculated from the the- oretical null distribution yielded 52 significant results, while the p-values calculated from the estimated null ... See full document
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Structure and expression of mammalian metallothioneins
... The work presented here investigates the expression and gene structure of MTs in these two mammalian species; firstly investigating MT in the developing sheep brain, and secondly studyin[r] ... See full document
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Genetic diversity and gene expression analysis of Phytophthora pluvialis, a foliar pathogen of conifers : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy (PhD) in Genetics, Massey University, Manawatū, New Zealand
... the species (Barnes et al., 2004). The distribution of these two species differs, ...are species of Pinus, however D. septosporum can also infect species in other genera such as Abies, ... See full document
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Use of biologically active substances in hops
... a mixture of synthetic auxins, humic acids and fulvic acids may be very beneficial (Procházka et ...many experiments using synthetic analogues of some brassinoster- oids; they, among other things, ... See full document
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Models suggesting field experiments to test two hypotheses explaining successional diversity
... increase species 1, niche removals decrease spe- cies 2, or both. If species 1 eventually occupies nearly every site in the niche removal experiment, then a suc- cessional niche primarily maintains the ... See full document
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NICT@WMT09: Model Adaptation and Transliteration for Spanish English SMT
... The effects of model adaptation and translitera- tion techniques were evaluated using the Spanish- English language resources summarized in Ta- ble 1. In addition, the characteristics of this year’s testset are given in ... See full document
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Phylogenomic Mining of the Mints Reveals Multiple Mechanisms Contributing to the Evolution of Chemical Diversity in Lamiaceae
... examined gene family expansion, contraction, and expression across metabolic ...52 species studied here and the predicted proteomes of five additional land plants: Amborella trichopoda ...52 ... See full document
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A full Bayesian hierarchical mixture model for the variance of gene differential expression
... between two conditions has been based on a standardised fold-change, which is the fold-change divided by an estimate of its standard ...from gene to ...of gene expression levels. Modelling of ... See full document
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Sex-Specific Effects of Firemaster® 550 on Placenta, the Developing Brain, and Behavior.
... mRNA expression of various antioxidant enzymes, such as Sod2, increase in their expression in order to protect the placenta from oxidative stress in an increasingly rich oxygenated environment ...the ... See full document
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Identification of a Copper-Inducible Promoter for Use in Ectopic Expression in the Fungal Pathogen Histoplasma capsulatum
... CRP1 gene were obtained by screening a lambda genomic library with a probe containing sequence from clone ...CRP1 gene was determined after sequencing these clones ...the gene is at ⫺ 331 relative to ... See full document
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