[PDF] Top 20 Multiple Locus Variable Number Tandem Repeat Analysis for Typing of Staphylococcus epidermidis
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Multiple Locus Variable Number Tandem Repeat Analysis for Typing of Staphylococcus epidermidis
... polymorphic repeat loci identified in S. epidermidis (Se1, Se3, and Se5) were lo- cated in genes predicted to encode surface binding proteins that may have a functional role in adherence (Table ...(SD) ... See full document
6
Novel Multiple Locus Variable Number Tandem Repeat Analysis Method for Rapid Molecular Typing of Human Staphylococcus aureus
... the typing of Staphylococcus aureus isolates ...used typing schemes include multilocus sequence typing (MLST) and spa typing ...as multiple- locus ... See full document
5
Comparison of Multiple Locus Variable Number Tandem Repeat Analysis with Pulsed Field Gel Electrophoresis, spa Typing, and Multilocus Sequence Typing for Clonal Characterization of Staphylococcus aureus Isolates
... Multiple-locus variable-number tandem-repeat analysis (MLVA), a new PCR-based method of typing Staph- ylococcus aureus, was compared to pulsed-field gel ... See full document
6
Typing and Subtyping of Clostridium difficile Isolates by Using Multiple Locus Variable Number Tandem Repeat Analysis
... developed multiple-locus variable-number tandem-repeat analysis (MLVA) with automated fragment analysis and multicolored capillary electrophoresis as a ... See full document
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Comparison of Multiple Locus Variable Number Tandem Repeat Analysis with Pulsed Field Gel Electrophoresis Typing of Acinetobacter baumannii in China
... By analysis of the TR differences between the closest MLVA types, with reference to the corresponding PFGE profiles, we modified the criteria: (i) identical L-repeat VNTR profiles; (ii) compared between the ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis, a Novel Typing Scheme To Study the Genetic Relatedness and Epidemiology of Enterococcus faecium Isolates
... low-cost typing scheme that is rapid, reproducible, easy to perform, with the portable char- acter of MLST and the ability to recognize the epidemic MLST-C1 genogroup isolates would therefore be a useful tool for ... See full document
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Strain Typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by Using Multiple Locus Variable Number Tandem Repeat Analysis
... largest number of extrachromo- somal elements, plasmids, of any known bacterial species: nine circular plasmids and 12 linear plasmids (7, ...large number of pseudogenes ... See full document
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Francisella tularensis Strain Typing Using Multiple Locus, Variable Number Tandem Repeat Analysis
... In contrast to the California strains, the year 2000 tularemia cases clustered in Maricopa County, Ariz., are related, indeed identical, to each other when analyzed using our methods. Seven isolates of F. tularensis ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria meningitidis Yields Groupings Similar to Those Obtained by Multilocus Sequence Typing
... molecular typing and is already used by many research groups worldwide for epidemiological stud- ies, and a large public MLST database is readily available over the ... See full document
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Development of Multiple Locus Variable Number Tandem Repeat Analysis for Molecular Typing of Mycoplasma pneumoniae
... a typing system to be considered more or less ideal ...available typing meth- ods. In comparison, the HGDI of the P1 PCR-RFLP typing method for the 265 isolates was only ...each locus, with ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of the Swine Dysentery Pathogen, Brachyspira hyodysenteriae
... strain typing. The aim of the current study was to develop and test a multiple-locus variable-number tandem-repeat analysis (MLVA) method that could be used in ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Salmonella enterica Serovar Typhi
... most variable VNTR loci, TR2, TR4699, and SAL02 exhibited D values of ...SNP typing (23) and ribotyping (15) where the discriminatory power for both was only ...by typing only five of the nine VNTR ... See full document
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Assessment of disinfectant and antibiotic susceptibility patterns and multi-locus variable number tandem repeat analysis of Staphylococcus epidermidis isolated from blood cultures
... S. epidermidis are frequent in specific wards including neonatal intensive care units (NICU) (1) and con- tribute to 31% of all neonatal infections and 73% of neonatal bacteremia ...Multilocus variable ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis Genotyping of Human Brucella Isolates from Turkey
... In the present study, a total of 162 human Brucella isolates collected from different parts of Turkey during an 8-year pe- riod was evaluated by bacteriological, epidemiological, and molecular typing ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis as a Tool for Subtyping Listeria monocytogenes Strains
... Among the outbreak strains of serotype 4b, two strain subtypes continually reemerge. These are known as epidemic clone I (ECI) and epidemic clone II (ECII). These clones have been responsible for many outbreaks within ... See full document
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Development and validation of a multiple locus variable number tandem repeat analysis (MLVA) scheme for Fusobacterium necrophorum
... MLVA typing scheme developed for ...evaluate typing schemes (van Belkum et ...for typing schemes (van Belkum et ...after multiple passages through culture demon- strated the stability of the ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria gonorrhoeae
... RFLP typing and MLVA have both been shown to generate reproducible results and to have high discrimi- natory power, which was demonstrated by the classification of patients from a high-risk population in various ... See full document
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Identification of Variable Number Tandem Repeat (VNTR) Sequences in Legionella pneumophila and Development of an Optimized Multiple Locus VNTR Analysis Typing Scheme
... the analysis of a multiband pattern, and too many variables exist which complicate unambiguous type as- ...sequence typing approach, com- monly called multilocus sequence typing (18), is now regarded ... See full document
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Improved Multiple Locus Variable Number Tandem Repeat Assay for Staphylococcus aureus Genotyping, Providing a Highly Informative Technique Together with Strong Phylogenetic Value
... clustering analysis based upon the categor- ical distance coefficient and unweighted pair group method with arithmetic mean clustering ...spa typing together with the algorithm Based Upon Repeat ... See full document
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Genetic source tracking of an anthrax outbreak in Shaanxi province, China
... SNP analysis [4]. Other molecular typing methods, such as the multiple-locus variable-number tandem repeat ana- lysis (MLVA) [6–8], have also been used to ... See full document
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