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Sequence length and variation

Parallel DNA Sequence Approximate Matching with Multi Length Sequence Aware Approach

Parallel DNA Sequence Approximate Matching with Multi Length Sequence Aware Approach

... the variation of sequences length in a particular dataset, that will affect the ...longest sequence among the other will always have the longest common ...the sequence length become ...

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Length and sequence variation in evening bat D-loop mtDNA.

Length and sequence variation in evening bat D-loop mtDNA.

... Under this premise, duplication almost certainly is restricted to neighboring repeats because of the 52 bats sequenced, adjacent repeats are most similar and the dista[r] ...

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Length Variation, Heteroplasmy and Sequence Divergence in the Mitochondrial DNA of Four Species of Sturgeon (Acipenser)

Length Variation, Heteroplasmy and Sequence Divergence in the Mitochondrial DNA of Four Species of Sturgeon (Acipenser)

... As CLARK (1988) noted, relatively subtle differences in mu- tation rate may determine whether a system is tipped in favor of mutations leading to heteroplasmy, or segre- g[r] ...

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A Novel Type of Sequence Variation: Multiple-Nucleotide Length Polymorphisms Discovered in the Bovine Genome

A Novel Type of Sequence Variation: Multiple-Nucleotide Length Polymorphisms Discovered in the Bovine Genome

... cDNA sequence using three expressed sequence tags (BC114855, DV838893, and AB240582) with a genomic DNA contig (AAFC03043460) for the former gene and aligning the human mRNA sequence (NM_001883) with ...

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The B30.2(SPRY) Domain of the Retroviral Restriction Factor TRIM5α Exhibits Lineage-Specific Length and Sequence Variation in Primates

The B30.2(SPRY) Domain of the Retroviral Restriction Factor TRIM5α Exhibits Lineage-Specific Length and Sequence Variation in Primates

... Received 23 September 2004/Accepted 18 December 2004 Tripartite motif (TRIM) proteins are composed of RING, B-box 2, and coiled coil domains. Some TRIM pro- teins, such as TRIM5 ␣ , also possess a carboxy-terminal ...

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Mitochondrial DNA sequence variation and neurodegeneration

Mitochondrial DNA sequence variation and neurodegeneration

... We can theoretically follow the transmission of mtDNA from the original ‘ancestor mother’ by identifying common polymorphisms that have accumulated with time. Specific and unique sets of those common polymorphisms define ...

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Heteroplasmy, Length and Sequence Variation in the mtDNA Control Regions of Three Percid Fish Species (Perca fluviatilis, Acerina cernua, Stizostedion lucioperca)

Heteroplasmy, Length and Sequence Variation in the mtDNA Control Regions of Three Percid Fish Species (Perca fluviatilis, Acerina cernua, Stizostedion lucioperca)

... mtDNA length variation hetero- levels of mtDNA sequence variation and high levels of plasmy are not known; however, several models have geographical structuring among Scandinavian perch been ...

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Maximum length sequence and Bessel diffusers using active technologies

Maximum length sequence and Bessel diffusers using active technologies

... Above 1100Hz, the active controller is ineffective and so the reflection coefficients are no longer determined by a maximum length sequence. The performance of the diffuser is now dependent on the ...

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Simple sequence repeat variation in the Daphnia pulex genome

Simple sequence repeat variation in the Daphnia pulex genome

... The higher level of heterozygosity in G/C loci is consis- tent with direct estimates of the mutation rate using Caenorhabditis elegans mutation accumulation lines, where the G/C homopolymer mutation rate was ~20 fold ...

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The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length

... natural variation in telomere length across the ...that variation in the gene protection of telomeres 2 (pot-2) is correlated with differences in ...Natural variation in pot-2 affects gene ...

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Genetic Architecture of Natural Variation of Telomere Length in Arabidopsis thaliana

Genetic Architecture of Natural Variation of Telomere Length in Arabidopsis thaliana

... telomeric sequence and associated pro- tein complexes are fairly conserved across eukaryotes, the length of telomeric arrays is known to vary extensively among different organisms; budding yeast telomeres ...

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The expected variation of random bounded integer sequences of finite length

The expected variation of random bounded integer sequences of finite length

... its most compelling aspect is its vertical variation, that is, the sum of the vertical distances between its adjacent terms. Denoted by varw, the vertical variation of the sequence in (1.1) is var w ...

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The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length.

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length.

... the variation identified in each of the 208 strains to each other in pairwise ...of sequence data from all strains that make up an isotype led to a 70-fold median depth of coverage ( Figure S6 ), enabling ...

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Excision of DNA fragments corresponding to the unit-length a sequence of herpes simplex virus type 1 and terminus variation predominate on one side of the excised fragment.

Excision of DNA fragments corresponding to the unit-length a sequence of herpes simplex virus type 1 and terminus variation predominate on one side of the excised fragment.

... DNA fragments corresponding to the unit-length a sequence of herpes simplex virus type 1 (HSV-1) were identified in HSV-1 DNA preparations extracted by the method of Hirt.. The DNA fragm[r] ...

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Effect of Length on Correlation of PN Sequence and Gold Sequence

Effect of Length on Correlation of PN Sequence and Gold Sequence

... Pseudo-random sequence is the basis of spread spectrum communication systems intern CDMA (code division multiple access communication ...direct sequence spread Spectrum (DSSS), one technique PN (pseudo ...

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Effect of length on Correlation of PN sequence and Gold sequence

Effect of length on Correlation of PN sequence and Gold sequence

... Pseudo-random sequence is the basis of spread spectrum communication systems intern CDMA (code division multiple access communication ...direct sequence spread Spectrum (DSSS), one technique PN (pseudo ...

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Positional Encoding to Control Output Sequence Length

Positional Encoding to Control Output Sequence Length

... each length, the proposed method can generate a text of any length even if the tar- get length is not present in training ...generation length but also improve the ROUGE ...

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Length Variation of Toothed Belt During Exploitation

Length Variation of Toothed Belt During Exploitation

... of length (elongation) of the tractive element gradually occurs during exploitation and it permanently stays, even after the belt is ...in. Variation of the belt’s pitch leads to disturbance in operation of ...

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On the variation of a functional trail mechanisms and consequences of petiole length variation in trifoleum repens

On the variation of a functional trail mechanisms and consequences of petiole length variation in trifoleum repens

... genotypic variation: genotypes with different fitness related trait values are hypothesized to be selected in different microhabitats (Via & Lande, 1985; Falconer & Mackay, 1996; Kingsolver et ...genotypic ...

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Length polymorphisms of simple sequence repeat DNA in soybean.

Length polymorphisms of simple sequence repeat DNA in soybean.

... ancestral cultivars that include genotypes that form the germplasm base of cultivars grown in the southern United States, (4) southern U.S. cultivars that include soybeans de[r] ...

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