[PDF] Top 20 Analysis of Escherichia coli O157 clinical isolates by multilocus sequence typing
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Analysis of Escherichia coli O157 clinical isolates by multilocus sequence typing
... E. coli O157 isolates has clin- ical significance and is important from a diagnostic stand- point because in such cases, stx- and Stx-independent procedures are required to detect strains that might ... See full document
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Assignment of Staphylococcus Isolates to Groups by spa Typing, SmaI Macrorestriction Analysis, and Multilocus Sequence Typing
... spa typing data for Staphylococcus ...spa typing/BURP to those obtained by currently well-established methods, ...macrorestriction analysis and multilocus sequence ... See full document
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Multilocus sequence typing (and phylogenetic analysis) of Campylobacter jejuni and Campylobacter coli strains isolated from clinical cases in Greece
... C. coli clinical strains isolated from children with gastroenteritis, was investigated using the multilocus sequence typing method ...This analysis establishes for the first time ... See full document
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Multilocus Sequence Typing Analysis of Human and Animal Clostridium difficile Isolates of Various Toxigenic Types
... A multilocus sequence typing (MLST) scheme was developed to study the genetic relationships and popu- lation structure of 72 Clostridium difficile isolates from various hosts, geographic ... See full document
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Global Multilocus Sequence Typing Analysis of Mycoplasma bovis Isolates Reveals Two Main Population Clusters
... other clinical presentations in cattle, including mastitis, oti- tis, arthritis, and reproductive ...a multilocus sequence typing (MLST) scheme was developed and applied to the ... See full document
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Multilocus Sequence Typing Analysis of Clostridium perfringens Isolates from Necrotic Enteritis Outbreaks in Broiler Chicken Populations
... the typing of intestinal C. perfringens isolates (n ⴝ 61) from outbreaks of NE collected from several areas of Southern Ontario, using a recently developed multilocus sequence typing ... See full document
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Analysis of a Uropathogenic Escherichia coli Clonal Group by Multilocus Sequence Typing
... comparison and, therefore, does not suffer from the drawbacks of gel-based fingerprinting methods. Sequence data are easily comparable and transferable between laboratories and are highly reproducible (2, 12). ... See full document
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Multilocus Sequence Typing and Phylogenetic Analysis of Propionibacterium acnes
... clonal clusters to which they were not closely related according to the phylogenetic tree. A detailed analysis of each of the 76 genes by tree construction revealed a mosaic pattern in the strains HL025PA1, SK187, ... See full document
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Clonal Analysis of Staphylococcus epidermidis Isolates Carrying or Lacking Biofilm Mediating Genes by Multilocus Sequence Typing
... ST27 isolates. In addition to ica, the majority of ST27 isolates carry different SCCmec cassettes and multiple copies of the insertion sequence ...ST27 isolates withstand hostile external ... See full document
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Multilocus Sequence Typing Reveals a Lack of Diversity among Escherichia coli O157:H7 Isolates That Are Distinct by Pulsed Field Gel Electrophoresis
... Sequence analysis has multiple advantages over fingerprint- ing-based methods, including shorter assay time, less subjec- tivity in interpretation of results, fully transferable data that are comparable ... See full document
5
Comparison of Probe Hybridization Array Typing to Multilocus Sequence Typing for Pathogenic Escherichia coli
... CGs. Isolates of CG13 and 23 are both phylogenetic group A, while CG38 and CG47 are both group ...CG58 isolates were correctly classified in the cluster analysis, only two vali- dation ... See full document
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Semiautomation of Multilocus Sequence Typing for the Characterization of Clinical Isolates of Neisseria meningitidis
... Multilocus sequence typing (MLST) was therefore intro- duced as a national DNA sequence typing service for the characterization of isolates of ...of sequence information, ... See full document
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Usefulness of Multilocus Sequence Typing for Characterization of Clinical Isolates of Candida albicans
... the analysis of nucleotide polymorphisms of the sequences of approximately 450- to 500-bp internal fragments (loci) of housekeeping ...other typing methods is that sequence data can be easily ... See full document
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Multilocus Sequence Typing of Escherichia coli O26:H11 Isolates Carrying stx in Canada Does Not Identify Genetic Diversity
... power. Sequence analysis of the mdh, gnd, gcl, ppk, metA, fliC, ftsZ, relA, recN, and metG genes from strains isolated from 1999 to 2003 in the different Canadian provinces was ...O26 isolates to ... See full document
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Development of a Multilocus Sequence Typing Scheme for Characterization of Clinical Isolates of Acinetobacter baumannii
... a typing system is required that is characterized by excellent discriminatory power but even more importantly by high inter- laboratory reproducibility that permits the development of a central databank of strain ... See full document
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Multilocus Sequence Typing of Klebsiella pneumoniae Nosocomial Isolates
... DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19:2496–2497. 27. van der Zee, A., N. Steer, E. Thijssen, J. Nelson, A. van’t Veen, and A. Buiting. 2003. Use of multienzyme multiplex ... See full document
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Major Uropathogenic Escherichia coli Strain Isolated in the Northwest of England Identified by Multilocus Sequence Typing
... particular clinical significance due to the limited therapeutic options that are ...E. coli infections are hampered by a poor under- standing of the population biology of these ...E. coli to ... See full document
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Multilocus Sequence Typing versus Pulsed Field Gel Electrophoresis for Characterization of Extended Spectrum Beta Lactamase Producing Escherichia coli Isolates
... the analysis, bands of the same size are assumed to be identical in ...bacterial isolates that share a minimum of 8 of the 10 alleles with other members of the ... See full document
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Epidemiological Typing of Serratia marcescens Isolates by Whole Genome Multilocus Sequence Typing
... wgMLST analysis was also performed using the BioNumerics cloud-based calculation ...of isolates in the nodes (i.e., isolates with the same allelic ... See full document
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Multilocus Sequence Typing of Intercontinental Bovine Staphylococcus aureus Isolates
... eBURST analysis, which identified two bovine-associated strains related to ST97 in the ...detected. Analysis of S. au- reus isolates from bovine mastitis and from other hosts from a broader ... See full document
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