[PDF] Top 20 Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of Shigella sonnei
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Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of Shigella sonnei
... A multilocus variable-number tandem-repeat (VNTR) analysis (MLVA) method was developed and evaluated for the subtyping of Shigella sonnei ...the repeat ... See full document
7
Application of Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of the Agent of Leptospirosis
... copy number of repeats (data not ...using Tandem Repeats Finder software ...criteria: repeat size, 15 to 140 bp; number of repeats, 2 to 12; sequence homology between repeats, ⬎ ...further ... See full document
9
Molecular typing of Salmonella enterica serovar Enteritidis isolates from food-producing animals in Japan by multilocus variable-number tandem repeat analysis: evidence of clonal dissemination and replacement
... multiple-locus variable-number tandem repeat analysis, pulsed-field gel electrophoresis, and phage typing for subtype analysis of Salmonella enterica serotype ... See full document
5
Utility of Multilocus Variable Number Tandem Repeat Analysis as a Molecular Tool for Phylogenetic Analysis of Shigella sonnei
... four Shigella species for typing Shigella ...four Shigella species and pathogenic ...four Shigella species into distinct groups. Tandem-repeat loci may have ... See full document
6
Evaluation of a Multilocus Variable Number Tandem Repeat Analysis Scheme for Typing Human Brucella Isolates in a Region of Brucellosis Endemicity
... the typing of Brucella species for epidemiological purposes by conventional molecular typing methods has remained ...Recently, multilocus variable- number ... See full document
6
Selection and Validation of a Multilocus Variable Number Tandem Repeat Analysis Panel for Typing Shigella spp
... DNA-based molecular typing methods, such as ribotyping (5), plasmid profile analysis, re- striction fragment length polymorphism (25, 26), and pulsed- field gel electrophoresis (PFGE) (37), has ... See full document
11
Multilocus Variable Number Tandem Repeat Analysis for Investigation of Clostridium difficile Transmission in Hospitals
... Current molecular-typing methods for detection of outbreaks and nosocomial transmission are labor-intensive, subjective, or insufficiently discriminatory to differentiate between closely related ...of ... See full document
9
Use of Multilocus Variable Number Tandem Repeat Analysis for Typing Mycobacterium avium subsp paratuberculosis
... a molecular typing method to facilitate meaningful comparative DNA fingerprinting of ...reservoirs, multilocus variable-number tandem-repeat analysis (MLVA) was ... See full document
7
Staphylococcal Interspersed Repeat Unit Typing of Staphylococcus aureus: Evaluation of a New Multilocus Variable Number Tandem Repeat Analysis Typing Method
... accurate typing method to design cost-effective intervention and prevention strategies (45, 48, ...large number of molecular typing methods have been developed to assess strain relatedness for ... See full document
9
Multiple Locus Variable Number Tandem Repeat Analysis for Typing of Staphylococcus epidermidis
... further analysis in 30 clin- ical isolates of ...the molecular weight standards GeneRuler 100 bp DNA Lad- der (Fermentas International ...to repeat copy numbers for each isolate (Table 2). To verify ... See full document
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Genetic source tracking of an anthrax outbreak in Shaanxi province, China
... SNP analysis [4]. Other molecular typing methods, such as the multiple-locus variable-number tandem repeat ana- lysis (MLVA) [6–8], have also been used to illustrate the ... See full document
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Development of Multiple Locus Variable Number Tandem Repeat Analysis for Molecular Typing of Mycoplasma pneumoniae
... the number of TRs, PCR primers targeting the regions flanking TR loci were ...of repeat copy number variations, the PCR products were purified with a Wizard PCR preps DNA purification system ... See full document
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Multilocus Variable Number Tandem Repeat Analysis and Multilocus Sequence Typing Reveal Genetic Relationships among Clostridium difficile Isolates Genotyped by Restriction Endonuclease Analysis
... study, multilocus sequence typing (MLST) and multilocus variable-number tandem-repeat analysis (MLVA) were performed on a set of 157 spatially and temporally ... See full document
7
Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria meningitidis Yields Groupings Similar to Those Obtained by Multilocus Sequence Typing
... the number of ...highly variable repeat numbers, making these loci unsuitable for population ...the analysis of outbreaks, whereas MLST cannot dis- criminate ...a number of ST-11 ... See full document
10
Molecular Characterization of Salmonella enterica Serovar Typhimurium Isolated from Human, Food, and Animal Sources in Malaysia
... using multilocus variable number tandem repeat analysis (MLVA) and pulsed-field gel electrophoresis ...common variable number tandem repeat (VNTR) ... See full document
9
Comparison between Salmonella enterica Serotype Enteritidis Genotyping Methods and Phage Type
... among typing results collected by applying multilocus vari- able-number tandem-repeat analysis (MLVA), pulsed-field gel electrophoresis (PFGE), and automated ribotyping, with a ... See full document
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Novel Multiple Locus Variable Number Tandem Repeat Analysis Method for Rapid Molecular Typing of Human Staphylococcus aureus
... 3. Francois, P., A. Huyghe, Y. Charbonnier, M. Bento, S. Herzig, I. Topolski, B. Fleury, D. Lew, P. Vaudaux, S. Harbarth, W. van Leeuwen, A. van Belkum, D. S. Blanc, D. Pittet, and J. Schrenzel. 2005. Use of an automated ... See full document
5
Francisella tularensis Strain Typing Using Multiple Locus, Variable Number Tandem Repeat Analysis
... potential variable-number tandem repeats (VNTRs), we developed a multilocus VNTR analysis (MLVA) typing system for this ...Cluster analysis identified two genetically ... See full document
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Use of Highly Discriminatory Fingerprinting to Analyze Clusters of Clostridium difficile Infection Cases Due to Epidemic Ribotype 027 Strains
... compared multilocus variable-number tandem-repeat analysis (MLVA) and macrorestriction endonu- clease analysis using pulsed-field gel electrophoresis (PFGE) to determine ... See full document
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Multilocus Variable Number Tandem Repeat Analysis of Clostridioides difficile Clusters in Ribotype 027 Isolates and Lack of Association with Clinical Outcomes
... MLVA typing was conducted on strains identified as R027 using the method described by van den Berg et ...Five variable-number tandem-repeat (VNTR) loci, designated A6, B7, C6, E7, and ... See full document
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