[PDF] Top 20 Proceedings of BioNLP Shared Task 2011 Workshop
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Proceedings of BioNLP Shared Task 2011 Workshop
... The BioNLP Shared Task 2011 is the second in the series, following up on the first event organized in ...the task was organized as a collaboration between several groups in Asia, Europe ... See full document
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Overview of BioNLP 2011 Protein Coreference Shared Task
... from BioNLP Shared Task (BioNLP- ST, hereafter) 2009 that coreference structures in biomedical text substantially hinder the progress of fine-grained IE (Kim et ... See full document
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Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011
... GE task corpus as supplemen- tary material, indicating that the GE annotations are largely compatible with ID ones (see detailed results ...al., 2011), none applied the analyses for supporting tasks, such ... See full document
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MSR NLP Entry in BioNLP Shared Task 2011
... We experimented with feature reduction and feature combination within the set of features described here. For feature reduction we tried a number of simple approaches that typically work well in text classification. The ... See full document
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BioNLP Shared Task 2011: Supporting Resources
... To enable reproducibility of our resources, we provide a publicly accessible repository containing the automated procedure and our processing scripts used to produce the released data. This repository also contains ... See full document
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BioNLP Shared Task 2011 Bacteria Biotope
... of BioNLP BB Task 2011 consists of a set of Web pages that were selected for their ...IE task more difficult compared to scientific ... See full document
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Proceedings of the BioNLP 2018 workshop
... of shared tasks and growing numbers of workshops dedicated to specific biomedical and clinical sublanguages and ...The BioNLP meeting has now been ongoing for 17 years. BioNLP continues to stay the ... See full document
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Proceedings of the BioNLP 2009 Workshop
... years, BioNLP 2009 was novel in two ...first workshop since formation of the SIGBIOMED Association for Computational Linguistics Special Interest ...a shared task associated with the ... See full document
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Overview of BioNLP Shared Task 2013
... CG task concerns the extraction of events relevant to cancer, covering molecular foundations, cellular, tissue, and organ-level effects, and organism-level ...the task is novel in particular in extending ... See full document
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Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013
... CG task goal is the automatic extraction of events (Ananiadou et ...and task setting extend on those first established in the BioNLP ST 2009 (Kim et ...CG task extraction tar- gets are shown ... See full document
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Overview of the Bacteria Biotope Task at BioNLP Shared Task 2016
... Annotators used the AlvisAE annotation edi- tor (Papazian et al., 2012). In order to speed up the annotation process, we used Alvis Suite (Ba and Bossy, 2016) to automatically pre-annotate the corpus. It included the ... See full document
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The Taming of Reconcile as a Biomedical Coreference Resolver
... the BioNLP 2011 Shared Task, we use Reconcile, a coreference resolution engine, by replacing some pre-processing components and adding a new mention ...the task, F-score ... See full document
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BioNLP Shared Task 2013: Supporting Resources
... the task participants can eas- ily swap the output of one system for ...the BioNLP 2011 Shared Task, and included sentence splitting of the annotated texts using the Genia Sentence ... See full document
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Overview of the Epigenetics and Post translational Modifications (EPI) task of BioNLP Shared Task 2011
... This primary corpus text selection protocol does not explicitly target reverse reactions such as deacetylation, and the total number of these events in the resulting corpus was low for many types. To be able to measure ... See full document
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Proceedings of The 5th Workshop on BioNLP Open Shared Tasks
... the workshop, paper submissions were open exclusively to the teams that had completed at least one task as well as the task ...the workshop out of 38 submitted ... See full document
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BioNLP Shared Task 2011 – Bacteria Gene Interactions and Renaming
... Guidelines In order to simplify the task, only short names of gene/protein/groups in B. subtilis were considered. Naming conventions set short names of four letters long with an upper case let- ter at the end for ... See full document
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Overview of Genia Event Task in BioNLP Shared Task 2011
... The task introduced in BioNLP-ST 2009 was re- named to Genia event (GE) task, and was hosted again in BioNLP-ST 2011, which also hosted four other IE tasks and three supporting tasks ... See full document
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Overview of the Entity Relations (REL) supporting task of BioNLP Shared Task 2011
... 2009 shared task ...Salakoski, 2011) and VIBGhent (Van Landeghem et al., 2011) further agree in the choice of Support Vector Machines for the recognition of entities and the extraction of ... See full document
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Event Extraction as Dependency Parsing for BioNLP 2011
... Our participation in the BioNLP shared task proves that standard parsing tools (i.e., maximum-spanning tree parsers, parse rerankers) can be successfully used for event extraction. We achieved this ... See full document
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Adapting a General Semantic Interpretation Approach to Biological Event Extraction
... to BioNLP’09 Shared Task on Event Extraction, organizers of the second BioNLP Shared Task on Event Extraction (BioNLP- ST’11) (Kim et ...of BioNLP-ST’11 is gen- ... See full document
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