[PDF] Top 20 Proceedings of the BioNLP Shared Task 2013 Workshop
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Proceedings of the BioNLP Shared Task 2013 Workshop
... BioNLP-ST 2013 follows the general outline and goals of the previous ...in BioNLP-ST 2013 cover many new hot topics in biology that are close to biologist ...needs. BioNLP-ST ... See full document
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BioNLP shared Task 2013 – An Overview of the Bacteria Biotope Task
... The categorization of entities by a large ontology (sub-task 1) offers a novel task to the BioNLP- ST community; a close examination of the annotated corpus allowed us to anticipate the challenges ... See full document
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Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013
... the BioNLP ST’09 (52% F-score) and in four out of eight tasks in BioNLP ST’11 (53% F-score for the comparable GE task) (Bj¨orne and Salakoski, ...GE task considered in BioNLP ST’09 and ... See full document
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BioNLP Shared Task 2013: Supporting Resources
... the task participants can eas- ily swap the output of one system for ...the BioNLP 2011 Shared Task, and included sentence splitting of the annotated texts using the Genia Sentence Splitter, 4 ... See full document
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Proceedings of The 5th Workshop on BioNLP Open Shared Tasks
... Hai-Long Trieu, Anh-Khoa Duong Nguyen, Nhung Nguyen, Makoto Miwa, Hiroya Takamura and Sophia Ananiadou . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ... See full document
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Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013
... Results are shown separately for each event type in Table 7. The results largely mirror the over- all performance, with the NaCTeM system show- ing better performance for 13 out of the 21 event types present in the test ... See full document
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TEES 2 1: Automated Annotation Scheme Learning in the BioNLP 2013 Shared Task
... to task rules is the occasional invalid predicted event. The Shared Task test set evalua- tion servers will not accept any invalid events, so these errors had to be resolved in some ...the ... See full document
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Overview of the Bacteria Biotope Task at BioNLP Shared Task 2016
... The information on bacteria biotopes is mostly ex- pressed in free text (e.g., articles or free-text fields of databases) describing very diverse locations (any physical location may be a bacteria habitat) in many ... See full document
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A fast rule based approach for biomedical event extraction
... the BioNLP 2013 event extraction ...extraction task of the BioNLP 2013 shared task, the system obtained the best results on strict matching and the third best on ... See full document
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Overview of BioNLP Shared Task 2013
... the BioNLP-ST series belong to the molecular biology domain and its related ...the BioNLP-ST series proposes a linguistically motivated approach to event representation that enables the evaluation of the ... See full document
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Proceedings of the BioNLP 2018 workshop
... of shared tasks and growing numbers of workshops dedicated to specific biomedical and clinical sublanguages and ...The BioNLP meeting has now been ongoing for 17 years. BioNLP continues to stay the ... See full document
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Proceedings of the BioNLP 2009 Workshop
... years, BioNLP 2009 was novel in two ...first workshop since formation of the SIGBIOMED Association for Computational Linguistics Special Interest ...a shared task associated with the ... See full document
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BioNLP Shared Task 2013 – An overview of the Genic Regulation Network Task
... (GRN) task consists of (1) extracting information on molecular interactions between genes and proteins that are described in scientific literature, and (2) using this information to reconstruct a regulation ... See full document
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Proceedings of BioNLP Shared Task 2011 Workshop
... The BioNLP Shared Task 2011 is the second in the series, following up on the first event organized in ...the task was organized as a collaboration between several groups in Asia, Europe and ... See full document
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Proceedings of the 4th BioNLP Shared Task Workshop
... Louise Deléger, Robert Bossy, Estelle Chaix, Mouhamadou Ba, Arnaud Ferré, Philippe Bessières and Claire Nédellec . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ... See full document
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Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task
... Shared tasks have a strong tradition in the BioNLP community. The TREC Genomics, KDD cup, JNLBPA, LLL and BioCreative tasks have focused the efforts of the community on timely challenges in the domain, both ... See full document
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Proceedings of the 18th BioNLP Workshop and Shared Task
... Asma Ben Abacha, Chaitanya Shivade and Dina Demner-Fushman . . . . . . . . . . . . . . . . . . . . . . . . . 370 PANLP at MEDIQA 2019: Pre-trained Language Models, Transfer Learning and Knowledge Distillation Wei Zhu, ... See full document
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BioNLP Shared Task 2011: Supporting Resources
... This paper describes the supporting resources provided for the BioNLP Shared Task 2011. These resources were constructed with the goal to alleviate some of the burden of sys- tem development from the ... See full document
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BioNLP Shared Task 2011 Bacteria Biotope
... BB task is the first step towards linking information on bacteria at the molecular level to ecological ...BB task mainly aims at solving the first information extraction ... See full document
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HITSZ ICRC: A Report for SMM4H Shared Task 2019 Automatic Classification and Extraction of Adverse Effect Mentions in Tweets
... of Task 1 was formulated as follows: given a tweet, identify the text span of adverse effect ...of task 2 is to distinguish adverse effect mentions from similar non-ADR ... See full document
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