protein sequence
Visualizing the Protein Sequence Universe
... proteins. Protein sequence annotation is an example of one of the grand challenges of modern biology that requires a focused, concentrated effort of experts from multiple scientific ...
9
Biocomputational Analysis of Chlamydia abortus Protein Sequence
... (15) protein sequence of Chlamydia abortus (C abortus) were retrieved from the GenBank ...abortus protein showed that some were basic (>7) nature and acidic (<7) in nature ...of protein ...
9
Visualizing the Protein Sequence Universe
... the Protein Se- quence Universe (PSU), the protein sequence space, together with the costs and complexities of manual curation creates a major bottleneck in life sciences ...using sequence ...
10
MULTI DIMENSION PROTEIN IMPACT MATRIX BASED PROTEIN SEQUENCE PREDICTION USING DATA MINING
... Dimension Protein Impact Matrix Based Protein Sequence Prediction: To improve the performance of protein structure prediction, a novel protein impact matrix based approach has been ...
8
FPGA-based protein sequence alignment : A review
... of protein sequence alignment can be done with some modification to the SW algorithm with used the only one row version of an alignment matrix named ‘one row c’ as reference for the next computation during ...
5
MESSA: MEta-Server for protein Sequence Analysis
... local sequence properties, spatial structure and function are usually intercon- nected, more accurate conclusions can be derived by addressing these questions ...the protein and predicted three- dimensional ...
12
V Lab Protein: Virtual Collaborative Lab for Protein Sequence Analysis
... Recent development of genome and gene analysis technology enabled rapid accumulation of biological data. To utilize such huge data, a biologist needs to have resource-rich computing environment and user- friendly ...
8
Theoretically Analysis of Fusion Protein, Sequence and Folding
... Fusion protein strategies was one of the important technologies in biotechnology fields, thus the present study introduced novel analysis for fusion protein sequence and folding using theoretically ...
5
Condensed Matrix Descriptor for Protein Sequence Comparison
... of protein sequences owing to their very long sizes and unequal ...between protein sequences would not only be tedious but would involve steps not yet fully resolved, such as how to proceed when comparing ...
13
Visualizing the Protein Sequence Universe
... the Protein Se- quence Universe (PSU), the protein sequence space, together with the costs and complexities of manual curation creates a major bottleneck in life sciences ...use sequence ...
11
Computational analysis of protein sequence and structure
... of protein sequences in nature (Chothia, 1992; Blundell & Johnson, 1993; Orengo et al, ...multiple sequence information in profile methods (Bowie et ai, 1990; Bowie et al, ...sequenced protein ...
199
Protein sequence classification using feature hashing
... which protein sequence data are being ...for protein sequence classification, usually results in prohibitively high dimensional input spaces, for large values of ...to protein ...
8
Structural approaches to protein sequence analysis
... single sequence a whole family of related sequences is available for ...the sequence family, additional information may be obtained from the observed sequence conservation pattems, and the location ...
302
Visualizing the Protein Sequence Universe
... PSU as tool to facilitate annotation: Interactive visualization and exploration Integrates info on function, pathways, structure, and environment MDS preserves grouping structure of prot[r] ...
29
Integrative visual analysis of protein sequence mutations
... Third, we offer less complex, aggregated overviews that focus on functional or structural subunits like sec- ondary structure elements and illustrate the location and distribution of the mutations on the protein ...
11
Protein sequence studies using chromophoric reagent
... The kinetics of the reaction of DABITC with amino acids, peptides and proteins - has been investigated and the optimum conditions of using DABITC as a N-terminal determination and stepwi[r] ...
194
In-Silico Molecular Characterization of MST1 Protein
... major protein for β cell death named as ...its protein sequence from major protein sequence repository, analysing the physico-chemical properties, secondary structural elements and ...
5
The development of semantic meta-database: an ontology based semantic integration of biological databases
... needed particularly for offline usage. In this study, a GO-based protein sequence annotation tool named extended UTMGO is developed to meet these features. The tool employs two primary intelligent ...
131
PFP RFSM: Protein fold prediction by using random forests and sequence motifs
... of protein folds was proposed by Ding and colleagues ...the protein sequence by a number of sequence and structural descriptors, ...similar sequence representation as in Ding’s study ...
10
“ISOLATION, IDENTIFICATION AND CHARACTERIZATION OF Clostridium perfringens FROM COOKED MEAT-POULTRY SAMPLES AND IN SILICO BIOMODELING OF ITS DELTA ENTEROTOXIN” by Sinosh Skariyachan, Arpitha B Mahajanakatti, Usha B Biradar, Narasimha Sharma, Abhilash M, India.
... Improper cooking of meat and poultry products may cause food borne gastroenteritis by Clostridium perfringens due to its enterotoxin. In this study we isolated Clostridium perfringens from cooked meat, pork and poultry ...
9