[PDF] Top 20 Clostridium botulinum Group I Strain Genotyping by 15 Locus Multilocus Variable Number Tandem Repeat Analysis
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Clostridium botulinum Group I Strain Genotyping by 15 Locus Multilocus Variable Number Tandem Repeat Analysis
... Most group I C. botulinum type B strains are represented in three distinct clusters (2, 3, and 4), one of which (group 4) appears genetically very distant from the other two B ...to ... See full document
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Improved Multiple Locus Variable Number Tandem Repeat Assay for Staphylococcus aureus Genotyping, Providing a Highly Informative Technique Together with Strong Phylogenetic Value
... multiple-locus variable-number tandem-repeat (VNTR) analysis (MLVA) scheme for genotyping Staphylococcus ...of multilocus sequence typing (MLST) and spa typing in a ... See full document
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Extended Multilocus Variable Number Tandem Repeat Analysis of Clostridium difficile Correlates Exactly with Ribotyping and Enables Identification of Hospital Transmission
... 017. Multilocus variable-number tandem-repeat analysis (MLVA) is a highly discriminatory molecular subtyping method that has been applied to a number of bacterial species ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis in Genotyping Yersinia enterocolitica Strains from Human and Porcine Origins
... Multiple-locus variable-number tandem-repeat ...of 15 kV were used for ...was 15 kV, and the run temperature was set at ... See full document
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Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of Shigella sonnei
... A multilocus variable-number tandem-repeat (VNTR) analysis (MLVA) method was developed and evaluated for the subtyping of Shigella sonnei ...the repeat sequence loci in ... See full document
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Application of Multilocus Variable Number Tandem Repeat Analysis for Molecular Typing of the Agent of Leptospirosis
... copy number of repeats (data not ...borgpetersenii strain-specific VNTRs. The L. borgpetersenii serovar Hardjobovis strain L550 whole-genome sequence has been analyzed using Tandem Repeats ... See full document
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Multilocus Variable Number Tandem Repeat Typing of Mycobacterium ulcerans
... was consistently closely related by a single-locus difference to the South East Asian genotype. Numerical analyses of the profiles generated by both methods indicate the closest evolu- tionary link between strains ... See full document
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Typing and Subtyping of Clostridium difficile Isolates by Using Multiple Locus Variable Number Tandem Repeat Analysis
... the analysis were 57 reference strains, all seven subtypes of PCR ribotype 001, 27 toxin A-negative, toxin B-positive isolates belonging to PCR ribotype 017 from eight different countries, and 29 isolates ... See full document
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Multilocus Variable Number Tandem Repeat Analysis and Multilocus Sequence Typing Reveal Genetic Relationships among Clostridium difficile Isolates Genotyped by Restriction Endonuclease Analysis
... MLVA genotyping over ...REA group are toxA negative/toxB ⫹ and toxinotype VIII, while REA group AA isolates are toxA ⫺ /toxB ⫺ and toxinotype ...REA group BK isolates are toxA ⫹ /toxB ⫹ , ... See full document
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Francisella tularensis Strain Typing Using Multiple Locus, Variable Number Tandem Repeat Analysis
... potential variable-number tandem repeats (VNTRs), we developed a multilocus VNTR analysis (MLVA) typing system for this ...Cluster analysis identified two genetically distinct ... See full document
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Use of Highly Discriminatory Fingerprinting to Analyze Clusters of Clostridium difficile Infection Cases Due to Epidemic Ribotype 027 Strains
... compared multilocus variable-number tandem-repeat analysis (MLVA) and macrorestriction endonu- clease analysis using pulsed-field gel electrophoresis (PFGE) to determine ... See full document
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Use of Multilocus Variable Number Tandem Repeat Analysis for Typing Mycobacterium avium subsp paratuberculosis
... the group of R01 could be successfully divided in sub- groups, but on the other hand, 17 different RFLP types have the same MLVA ...the strain panel was based on RFLP types and as a result of that favors ... See full document
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Selection and Validation of a Multilocus Variable Number Tandem Repeat Analysis Panel for Typing Shigella spp
... the multilocus sequence typing (MLST) approach, greatly improved the current knowledge of the origin and phylogenetic evolution of Shigella ...genomospecies. Multilocus variable-number ... See full document
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Utility of Multilocus Variable Number Tandem Repeat Analysis as a Molecular Tool for Phylogenetic Analysis of Shigella sonnei
... identified 15 VNTR loci by ex- ploring five genomic sequences of four Shigella species for typing Shigella ...groups. Tandem-repeat loci may have variable num- bers in one species or serotype ... See full document
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Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria meningitidis Yields Groupings Similar to Those Obtained by Multilocus Sequence Typing
... Molecular typing has become an important tool for the study of the epidemiology and population structure of N. meningiti- dis. When MLST was introduced in 1998, N. meningitidis was the first bacterial pathogen used with ... See full document
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Comparison of Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Investigation of Clostridium difficile Transmission
... another strain is unclear, as all isolates were from the highly prevalent epidemic ...diverse strain collections (3, 12) has led to such cases being regarded as closely related, consistent with local ... See full document
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Multilocus Variable Number Tandem Repeat Analysis for Investigation of Clostridium difficile Transmission in Hospitals
... identification. Tandem Repeats Finder software was used to detect repeat elements in the ...Sequencing Group at the Sanger Institute and can be obtained from ... See full document
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Multilocus Variable Number Tandem Repeat Analysis Scheme for Chlamydia felis Genotyping: Comparison with Multilocus Sequence Typing
... nine tandem-repeat loci identified in the ...program Tandem Repeat Finder, four were polymorphic. The analysis of about 140 ...and 15, appear more widespread both in the samples ... See full document
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Evaluation of a Multilocus Variable Number Tandem Repeat Analysis Scheme for Typing Human Brucella Isolates in a Region of Brucellosis Endemicity
... have repeat unit sizes of 9 bp or greater, and microsatellites have repeat unit sizes of up to 8 bp ...in multilocus variable-number tandem-repeat anal- ysis (MLVA) have ... See full document
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Comparison of Multilocus Variable Number Tandem Repeat Analysis and Whole Genome Sequencing for Investigation of Clostridium difficile Transmission
... another strain is unclear, as all isolates were from the highly prevalent epidemic ...diverse strain collections (3, 12) has led to such cases being regarded as closely related, consistent with local ... See full document
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