[PDF] Top 20 Learning Protein–Protein Interaction Extraction using Distant Supervision

... It is very likely, that both negative and positive instances contain a certain amount of mislabeled examples (false positives, false negatives). There- fore, we utilize different heuristics to minimize the amount of ... See full document

... relation extraction, especially in cases with limited ...distance supervision approaches only extract relations expressed in single ...relation extraction is under-explored, even in the ... See full document

... 2 Learning for Named-Entity Extraction Several problems in Machine Learning are im- mensely benefited from a rich structural representa- tion of the data (Flach and Lachiche, 1999; Roth and Yih, ... See full document

... multi-instance learning to leverage mul- tiple sentences which mention an entity pair in distantly supervised relation ...by using mul- tilevel self-attention. To account for the noise in distant ... See full document

... of distant supervision in the following man- ner: “Given a pair of entities and their mentions in sentences from a corpus, at least one of the men- tions express the relation given in the ... See full document

... Our proposed models also leave open question- s for distantly supervised relation extraction task. First, they can not process new coming testing items efficiently, as we have to reconstruct the data matrix ... See full document

... relation extraction following the distant supervision paradigm have focused on exploiting large knowledge bases, from which they extract substantial amount of ...relation extraction process, ... See full document

... relation extraction. These are: (a) supervised learning approaches focussing on creating hand-labeled data and experimenting with a variety of lexical, syntac- tic and sematnic features (GuoDong et ... See full document

... Distant supervision relation extraction is to pre- dict the relation type of entity pair under the automatically-generated training ...ment learning, external environment and RL agent are two ... See full document

... Many traditional sampling strategies, such as query-by-committee (QBC) (Freund et al., 1992; Freund et al., 1997) and uncertainty sampling (Lewis and Gale, 1994), work by decreasing the variance of the learned model. In ... See full document

... machine learning, using support vector machines with a shallow linguistic kernel to identify each type of ...a distant supervised ap- proach to increase the size of the training ...the distant ... See full document

... (distant supervision), to incorporate labeled data into distant supervision for extracting relations from ...by distant supervision as in the previous work by Zhang et ...a ... See full document

... dataset, using the Yeast Protein Database to label Pubmed abstracts with the subcellular-localization ...of distant supervision to train event extractors from ...a distant source of ... See full document

... Distant supervision (DS) is an appealing learning method which learns from exist- ing relational facts to extract more from a text corpus. However, the accuracy is still not satisfying. In this ... See full document

... entity extraction from seven classes from ACE 2004 and entity detection from ...as learning source, where entities have been annotated in each Wikipedia ...the extraction patterns described in ... See full document

... et al., 2007). Our work was inspired by Mintz et al. (2009) who used Freebase as a knowledge base by making the DS assumption and trained relation ex- tractors on Wikipedia. Previous works (Hoffmann et al., 2010; Yao et ... See full document

... relation extraction for tasks like ACE are based on supervised learning of relations from small hand-labeled ...lexically distant in their ... See full document

... distant supervision (Riedel et ...improve distant supervised relation extraction with methods such as multi-instance multi-label learning (Surdeanu et ...partial supervision ... See full document

... We instead deal with a learning scenario where we only have entity-pair level labels that are either posi- tive or unlabeled. We proposed an extension to Sur- deanu et al. (2012) that can train on this dataset. ... See full document

... are learning model weights using distant supervision so that we can combine them more ...with distant supervision is a concern, manual annotation of temporal relations is known ... See full document