[PDF] Top 20 Multiple locus variable number tandem repeat analysis (MLVA) genotyping of human Brucella isolates in Malaysia
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Multiple locus variable number tandem repeat analysis (MLVA) genotyping of human Brucella isolates in Malaysia
... Data indicated in the dendrogram: Strain name in the laboratory Strain, complete panels MLVA16 genotypes in this article MLVA type, genotypes corresponding to each isolate in the Brucell[r] ... See full document
7
Strain Typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by Using Multiple Locus Variable Number Tandem Repeat Analysis
... 1). Isolates B31 and Cat flea were isolated in North America, while strains IP1, IP2, and IP3 are human cerebrospinal fluid isolates from France (Table ...1). MLVA revealed substantial ... See full document
7
Evaluation of a Multilocus Variable Number Tandem Repeat Analysis Scheme for Typing Human Brucella Isolates in a Region of Brucellosis Endemicity
... of tandem repeat loci and validation of an MLVA ...fingerprint variable-number tandem repeats (HOOF- Prints) MLVA panel of loci that have been described by Bricker et ... See full document
6
Staphylococcus aureus from 152 cases of bovine, ovine and caprine mastitis investigated by Multiple-locus variable number of tandem repeat analysis (MLVA)
... automated multiple loci Variable Number of Tandem Repeats (VNTR) Assay (MLVA) comprising 16 loci as a first line tool to investigate the population structure of ...115 MLVA ... See full document
8
Epidemiological and Phylogenetic Analysis of Spanish Human Brucella melitensis Strains by Multiple Locus Variable Number Tandem Repeat Typing, Hypervariable Octameric Oligonucleotide Fingerprinting, and rpoB Typing
... did MLVA-16 typing. It may be recommendable to undertake cluster analysis for this genotype using the MLVA-16 and HOOF-print markers, since for those strains involved in out- breaks with identical ... See full document
7
Improved Multiple Locus Variable Number Tandem Repeat Assay for Staphylococcus aureus Genotyping, Providing a Highly Informative Technique Together with Strong Phylogenetic Value
... the MLVA-14 assay, with 14 VNTRs in two panels, to genotype a strain are expressed as its allelic profile, correspond- ing to the number of repeats at each VNTR in the order Sa0122 (spa), Sa0266 (coa), ... See full document
8
Typing and Subtyping of Clostridium difficile Isolates by Using Multiple Locus Variable Number Tandem Repeat Analysis
... Although MLVA has yet to show its value in longer-term epidemiology or phylogeny studies, MLVA can be widely applied in outbreak ...Therefore, MLVA is an important new tool for study of the ... See full document
5
Multiple Locus Variable Number Tandem Repeat Analysis of Neisseria gonorrhoeae
... 124 isolates, containing a total of 430 ...the MLVA had sufficient discriminatory ...different MLVA type. Additional analysis of a pharyngeal isolate of this partner revealed that it ... See full document
10
Evaluating the impacts of stressors of Pseudomonas syringae pathovar tomato on the effectiveness of multi-locus variable number tandem repeat analysis and multi-locus sequence typing in microbial forensic investigations
... in repeat copy number between strains of a single microbial species ...copy number is often exploited for strain differentiation using MLVA ...[5]. MLVA typing involves PCR ... See full document
8
Multiple Locus Variable Number Tandem Repeat Analysis Genotyping of Human Brucella Isolates from Turkey
... relatives. MLVA-16 Orsay di- vided the 11 cases investigated here into six genotypes (geno- types 21, 22, 23, 25, 29, ...single repeat unit differences at one or two of the most variable ...in ... See full document
8
Multiple Locus Variable Number Tandem Repeat Analysis in Genotyping Yersinia enterocolitica Strains from Human and Porcine Origins
... Multiple-locus variable-number tandem-repeat analysis. The MLVA was based on the method described by Gierczynski et al. (20), with mod- ification of the PCR run ... See full document
6
Novel Multiple Locus Variable Number Tandem Repeat Analysis Method for Rapid Molecular Typing of Human Staphylococcus aureus
... as multiple- locus variable-number tandem-repeat analysis (MLVA), was introduced and ...an MLVA scheme based on seven variable-number ... See full document
5
Genetic source tracking of an anthrax outbreak in Shaanxi province, China
... Efficient genotyping methods are required not only to assist microbial forensics to track outbreaks back to their origins, but also for facilitating epidemiological studies in order to reduce the risk of an ... See full document
8
Multi-locus variable-number tandem repeat analysis of Chinese Brucella strains isolated from 1953 to 2013
... cluster analysis using the MLVA11 assay were meaningful in terms of the isolation time frame, host and region of these ...dominant Brucella species and biovars were ...cluster analysis results of the ... See full document
8
Identification of Variable Number Tandem Repeat (VNTR) Sequences in Legionella pneumophila and Development of an Optimized Multiple Locus VNTR Analysis Typing Scheme
... of tandem repeats in ...for genotyping (21) in spite of the fact that this species is much more genetically heterogeneous than other species for which MLVA can be regarded as a reference method, such ... See full document
10
Comparison of Two Multiple Locus Variable Number Tandem Repeat Analysis Methods for Molecular Strain Typing of Human Brucella melitensis Isolates from the Middle East
... Both MLVA schemes examined in this study can be used to epidemiologically type human ...highly variable markers. We evaluated the two MLVA schemes and compared their abilities to resolve rela- ... See full document
6
Genotypic characterization of gentamicin and cephalosporin resistant Escherichia coli isolates from blood cultures in a Norwegian university hospital 2011–2015
... real-time. Multiple-locus variable-number of tandem repeat analysis (MLVA) has been performed to assess clonal relatedness between ...cost-effective ... See full document
7
Improving resolution of public health surveillance for human Salmonella entericaserovar Typhimurium infection: 3 years of prospective multiple locus variable number tandem repeat analysis (MLVA)
... prospective MLVA typing. Sequence analysis was performed using an ABI 3130xl Genetic Analyzer (Applied ...non-labelled MLVA amplifica- tion ...observed number of repeats for each locus ... See full document
10
Development and validation of a multiple locus variable number tandem repeat analysis (MLVA) scheme for Fusobacterium necrophorum
... develop multiple locus variable number tandem repeat analysis (MLVA) as a strain typing technique for ...both isolates and mixed communities of bacteria. ... See full document
7
Mycobacterium bovis population structure in cattle and local badgers: co-localisation and variation by farm type
... includes Multiple-Locus Variable number tandem repeat Analysis (MLVA) to determine the Mycobacterium bovis genetic type present in both cattle, and the predominant ... See full document
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